Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898932.1_cds_XP_016448870.1_43481
CDS Infomation

[gene=LOC107773950] [db_xref=GeneID:107773950] [protein=transcription factor PIF1-like] [partial=5'] [protein_id=XP_016448870.1] [location=join(<253..684,3653..3751,3851..3916,4010..4075,6290..6676,7078..7156,7452..7456)] [gbkey=CDS]
Sequence

CATCGGTTCCAGAACTTCGGACACTTCTCGCGATTGCCTAGTCGAACAAGGTCAGAACTT
GGTCCGTCAAATTCGAGCAAGTCACCTAGAGAATCAACGGTCGTGGAATCAAACGAAACT
CCAATTTCAGGGCCTGAATCTAGGGTTTCATACGTAGCGGATAATGTAGTACCGGTTCCC
GGCGGAAATGTAGGATGTGGAGCTGTAAATGTCAACGGAACTGCGACTGCGTCAGCGGCA
ATTAGGGAACCGGCGGCGACATGTGAGCTTTCGGTGACGTCATCTCCCGGCTCAGGAAAC
AGTATAAACACCAGCGCTGAACCACCGCCACCGCCGTCGCAAACGGCGGCGTTGGCGACA
CCGACTGCTGCGGCATCGAATGATCGGAAACGTAAAGGAAGAGAAACGAACGATGGGGAT
GGTCAGAATGAGGAGGCTGAATTTGAGTCTGGTGATACAAAGAAGCATGCTCGTGGTTCA
ACATCTACAAAGCGATCTCGTGCTGCAGAGGTCCATAATCTTTCGGAAAGGAGACGTCGA
GACAGAATAAATGAGAAGATGAGGGCTCTGCAGGAACTGATACCACGCTGTAACAAGACA
GACAAAGCTTCAATGCTGGATGAGGCAATTGAGTATTTGAAATCACTGCAATTGCAAGTG
CAGATGATGTCCATGGGATGCGGCATGGTCCCGATGATGTATCCTGGAATGCAGCAGTAC
ATGCCAGCTATGGGAATGGGCATGGGTATGGGAATGGGTATGGAGATTGGCATGAACAGG
CCAATGGTGCCGTATCCACCTCTATTGCCGGGTGCAGCGATGCAGAATGCAGCTGCAGCA
GCACGAATGGGTCCTAGATTTCCTATGCCGCCGTTTCATTTGCCACCAGTTCCAGTACCA
GATCCTTCCAGGATGCAAGCCTCAAGTCAGCAAGATCCAATGCTACATCCACTTGTAGCA
CATAATCCCAACCAGCCAAGACTTCCGAATTTTAATGATCCATATCAACAGTTTTTTGGT
CTCCACCAGGCACAAGTGCAATTACCACAGAATCAGGCAGTAGAACAGCAGGGTAACAAT
AAACCCGGCAGCAGGAAAGAAGTTGGAAATCCAGGGAGTCCTCAATCTGGTTGA

Peptide Sequence

PEP ID

XP_016448870.1
PEP Infomation

PREDICTED: transcription factor PIF1-like, partial [Nicotiana tabacum]
Sequence

HRFQNFGHFSRLPSRTRSELGPSNSSKSPRESTVVESNETPISGPESRVSYVADNVVPVP
GGNVGCGAVNVNGTATASAAIREPAATCELSVTSSPGSGNSINTSAEPPPPPSQTAALAT
PTAAASNDRKRKGRETNDGDGQNEEAEFESGDTKKHARGSTSTKRSRAAEVHNLSERRRR
DRINEKMRALQELIPRCNKTDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMYPGMQQY
MPAMGMGMGMGMGMEIGMNRPMVPYPPLLPGAAMQNAAAAARMGPRFPMPPFHLPPVPVP
DPSRMQASSQQDPMLHPLVAHNPNQPRLPNFNDPYQQFFGLHQAQVQLPQNQAVEQQGNN
KPGSRKEVGNPGSPQSG

Transcript Sequence

Gene sequence data has not been registered.